MRI Data

Welcome to the MRI Data wiki collection. This wiki contains pages for MRI data and tools.

Wiki pages for the scanner, peripherals and imaging group servers are in MRI Systems.

Data and Formats

 * A Short Introduction to DICOM or Where's My Data?
 * Image Data Formats and Conversions

Tools

 * dcmdb
 * Using DICOMQueryTool
 * Using Osirix to retrieve data
 * DICOM to NifTI conversion
 * Slicer - A visualisation and image analysis package
 * FSL
 * OsriX 64-bit plugins

Analysis

 * fMRI Analysis
 * Download SPM and fsl
 * Granger Causality
 * Independent Component Analysis
 * Voxel Based Morphometry
 * Distortion Correction and Field Maps

SPM Tutorial Notes

 * The notes from the SPM Tutorial Nia did can be found here

VBM Tutorial Notes

 * The Notes from the VBM Tutorial can be found here